org.Hs.eg.db

DOI: 10.18129/B9.bioc.org.Hs.eg.db    

Genome wide annotation for Human

Bioconductor version: Release (3.6)

Genome wide annotation for Human, primarily based on mapping using Entrez Gene identifiers.

Author: Marc Carlson

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("org.Hs.eg.db")

Documentation

PDF		Reference Manual

Details

biocViews	AnnotationData, Homo_sapiens, OrgDb, humanLLMappings
Version	3.5.0
License	Artistic-2.0
Depends	R (>= 2.7.0), methods, AnnotationDbi(>= 1.39.3)
Imports	methods, AnnotationDbi
LinkingTo
Suggests	DBI, annotate, RUnit
SystemRequirements
Enhances
URL
Depends On Me	clariomdhumanprobeset.db, clariomdhumantranscriptcluster.db, clariomshumanhttranscriptcluster.db, clariomshumantranscriptcluster.db, CoCiteStats, FDb.InfiniumMethylation.hg18, FDb.InfiniumMethylation.hg19, FEM, GGHumanMethCancerPanelv1.db, GSReg, h10kcod.db, h20kcod.db, hcg110.db, hgfocus.db, hgu133a.db, hgu133a2.db, hgu133b.db, hgu133plus2.db, hgu219.db, hgu95a.db, hgu95av2.db, hgu95b.db, hgu95c.db, hgu95d.db, hgu95e.db, hguatlas13k.db, hgubeta7.db, hguDKFZ31.db, hgug4100a.db, hgug4101a.db, hgug4110b.db, hgug4111a.db, hgug4112a.db, hgug4845a.db, hguqiagenv3.db, hi16cod.db, Homo.sapiens, hs25kresogen.db, Hs6UG171.db, HsAgilentDesign026652.db, hta20probeset.db, hta20transcriptcluster.db, hthgu133a.db, hthgu133b.db, hu35ksuba.db, hu35ksubb.db, hu35ksubc.db, hu35ksubd.db, hu6800.db, huex10stprobeset.db, huex10sttranscriptcluster.db, hugene10stprobeset.db, hugene10sttranscriptcluster.db, hugene11stprobeset.db, hugene11sttranscriptcluster.db, hugene20stprobeset.db, hugene20sttranscriptcluster.db, hugene21stprobeset.db, hugene21sttranscriptcluster.db, HuO22.db, hwgcod.db, IlluminaHumanMethylation27k.db, illuminaHumanv1.db, illuminaHumanv2.db, illuminaHumanv2BeadID.db, illuminaHumanv3.db, illuminaHumanv4.db, illuminaHumanWGDASLv3.db, illuminaHumanWGDASLv4.db, JazaeriMetaData.db, KEGGlincs, LAPOINTE.db, lumiHumanAll.db, meshr, methyAnalysis, Mulder2012, Norway981.db, nugohs1a520180.db, OperonHumanV3.db, PartheenMetaData.db, pathview, pedbarrayv10.db, pedbarrayv9.db, POCRCannotation.db, Roberts2005Annotation.db, SHDZ.db, tRanslatome, u133x3p.db
Imports Me	annotatr, attract, bioCancer, BioMedR, cellity, chimeraviz, chipenrich, debrowser, dSimer, eegc, EGSEA, geneAttribution, geneXtendeR, GEOsearch, GOpro, GOSim, LINC, MCbiclust, MetaboSignal, MIGSA, mirIntegrator, missMethyl, NanoStringQCPro, PathwaySplice, RCAS, rCGH, REMP, rgsepd, rTRMui, SEPA, SMITE, SpidermiR, StarBioTrek, trena
Suggests Me	AllelicImbalance, annotate, AnnotationDbi, AnnotationFilter, AnnotationForge, AnnotationFuncs, BiocCaseStudies, BioCor, bumphunter, categoryCompare, cellTree, cgdv17, chipenrich.data, ChIPpeakAnno, ChIPseeker, CINdex, clusterProfiler, cnvGSA, CRISPRseek, crossmeta, derfinderPlot, DOSE, edgeR, eisa, esATAC, FunciSNP, GA4GHclient, GA4GHshiny, gage, gCMAPWeb, gCrisprTools, GeneAnswers, GenomicFeatures, GenomicRanges, globaltest, gmapR, GoogleGenomics, goProfiles, GOSemSim, goseq, GOstats, graphite, groHMM, GSAR, GSEABase, GUIDEseq, hpar, HTSanalyzeR, HTSeqGenie, ideal, InPAS, InterMineR, KEGGgraph, limma, miRLAB, miRNAtap, miRsponge, MLP, mvGST, Onassis, oneChannelGUI, ontoProc, oppar, Organism.dplyr, paxtoolsr, pcaExplorer, pcxn, PGSEA, Pigengene, prostateCancerTaylor, PSICQUIC, PureCN, R3CPET, ReactomePA, recount, RefNet, restfulSE, RforProteomics, RmiR, RnBeads, RpsiXML, RTopper, rtracklayer, rTRM, scde, SigFuge, tenXplore, ToPASeq, trackViewer, VariantFiltering, wiggleplotr

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	org.Hs.eg.db_3.5.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url	http://bioconductor.org/packages/org.Hs.eg.db/
Package Downloads Report	Download Stats