DOI: 10.18129/B9.bioc.GEOsearch    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.6 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see GEOsearch.


Bioconductor version: Release (3.6)

GEOsearch is an extendable search engine for NCBI GEO (Gene Expression Omnibus). Instead of directly searching the term, GEOsearch can find all the gene names contained in the search term and search all the alias of the gene names simultaneously in GEO database. GEOsearch also provides other functions such as summarizing common biology keywords in the search results.

Author: Zhicheng Ji, Hongkai Ji

Maintainer: Zhicheng Ji <zji4 at>

Citation (from within R, enter citation("GEOsearch")):


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## try http:// if https:// URLs are not supported


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PDF R Script GEOsearch: Extendable Search Engine for Gene Expression Omnibus
PDF   Reference Manual
Text   NEWS


biocViews GUI, Software
Version 1.1.4
In Bioconductor since BioC 3.2 (R-3.2) (2.5 years)
License GPL(>=2)
Depends R (>= 3.2)
Imports RCurl,,
Suggests knitr, shiny, DT,, org.At.tair.db,,,,,,,,,, org.Pf.plasmo.db,,, org.Sc.sgd.db,,
Depends On Me
Imports Me
Suggests Me
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Source Package GEOsearch_1.1.4.tar.gz
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