S4 generic functions needed by many Bioconductor packages.
| biocViews |
Infrastructure, Software |
| Version |
0.12.1 |
| In Bioconductor since |
BioC 2.10 (R-2.15) |
| License |
Artistic-2.0 |
| Depends |
methods, utils, graphics, stats, parallel |
| Imports |
methods, utils, graphics, stats, parallel |
| LinkingTo |
|
| Suggests |
Biobase, S4Vectors, IRanges, GenomicRanges, AnnotationDbi, oligoClasses, oligo, affyPLM, flowClust, affy, RUnit, DESeq2 |
| SystemRequirements |
|
| Enhances |
|
| URL |
|
| Depends On Me |
ACME, affy, affyPLM, altcdfenvs, AnnotationDbi, AnnotationForge, beadarray, Biobase, Biostrings, BSgenome, bsseq, Category, categoryCompare, chipseq, ChIPseqR, ChromHeatMap, cleanUpdTSeq, cn.mops, codelink, copynumber, CopyNumber450k, CRISPRseek, cummeRbund, DESeq, dexus, DNaseR, ensemblVEP, FEM, flowQ, geneplotter, GenomeInfoDb, genomeIntervals, GenomicAlignments, GenomicFeatures, GenomicFiles, GenomicRanges, Genominator, genoset, ggbio, girafe, GSEABase, Gviz, htSeqTools, interactiveDisplay, interactiveDisplayBase, IRanges, MBASED, meshr, methyAnalysis, minfi, MotifDb, MotIV, MSnbase, nucleR, oligo, Pbase, PICS, plethy, PSICQUIC, PWMEnrich, REDseq, Repitools, rMAT, rsbml, S4Vectors, scsR, shinyMethyl, ShortRead, simpleaffy, SplicingGraphs, TEQC, tigre, TSSi, UNDO, VariantAnnotation, VariantFiltering, xcms, XVector |
| Imports Me |
affyPLM, AllelicImbalance, annmap, annotate, AnnotationDbi, AnnotationForge, AnnotationHub, ArrayExpressHTS, biocGraph, BiocParallel, Biostrings, biosvd, biovizBase, BiSeq, blima, BSgenome, bumphunter, casper, Category, cghMCR, ChemmineDrugs, ChemmineOB, ChemmineR, chipenrich.data, ChIPpeakAnno, ChIPQC, ChIPseeker, chipseq, compEpiTools, crlmm, cummeRbund, curatedOvarianData, DESeq2, DEXSeq, DOQTL, DREAM4, DrugVsDisease, easyRNASeq, EBImage, EDASeq, eiR, eisa, epigenomix, fastseg, ffpe, flowBin, flowClust, flowCore, flowFP, flowQ, flowStats, flowWorkspace, fmcsR, frma, gCMAP, gCMAPWeb, GenomeInfoDb, GenomicAlignments, GenomicTuples, GGBase, GGtools, goseq, GOTHiC, graph, GSVA, gwascat, hopach, HTSeqGenie, intansv, KCsmart, KEGGandMetacoreDzPathwaysGEO, KEGGdzPathwaysGEO, LVSmiRNA, metaMS, methylPipe, methylumi, MinimumDistance, MiRaGE, monocle, NarrowPeaks, npGSEA, nucleR, oligo, oligoClasses, OrganismDbi, pcaMethods, pdInfoBuilder, PING, plrs, prada, ProCoNA, pRoloc, QuasR, R453Plus1Toolbox, RCytoscape, REDseq, RefNet, ReportingTools, RGalaxy, RGSEA, Ringo, rMAT, Rqc, Rsamtools, rsbml, rtracklayer, S4Vectors, SGSeq, simpleaffy, SLGI, snpStats, spliceSites, SplicingGraphs, Streamer, systemPipeR, triform, TSSi, unifiedWMWqPCR, UniProt.ws, VariantTools, XDE, XVector |
| Suggests Me |
ArrayTV, ASSET, baySeq, bigmemoryExtras, BiocCheck, BiocInstaller, BiocStyle, biocViews, BiRewire, CAFE, CAMERA, ccrepe, CellNOptR, CexoR, ChIPXpress, clipper, clonotypeR, CNEr, CNORfeeder, CNORfuzzy, cobindR, ConnectivityMap, cosmiq, COSNet, dagLogo, DBChIP, DEGreport, DMRcate, DNaseR, FGNet, flowCL, focalCall, gdsfmt, GENE.E, GeneNetworkBuilder, GeneOverlap, geneRxCluster, geNetClassifier, GOstats, GraphPAC, GWASTools, hiAnnotator, hiReadsProcessor, iClusterPlus, illuminaio, INPower, inSilicoMerging, kebabs, KEGGREST, M3D, massiR, MeSH.AOR.db, MeSH.db, MeSH.PCR.db, MeSHDbi, Metab, metagene, metagenomeSeq, metaseqR, MethylAid, Mirsynergy, MLInterfaces, motifStack, MSnID, MultiMed, mzR, netbiov, NetSAM, nondetects, org.MeSH.Aca.db, org.MeSH.Aga.PEST.db, org.MeSH.Ame.db, org.MeSH.Aml.db, org.MeSH.Ana.db, org.MeSH.Ani.FGSC.db, org.MeSH.Ath.db, org.MeSH.Atu.K84.db, org.MeSH.Bfl.db, org.MeSH.Bsu.168.db, org.MeSH.Bsu.Bsn5.db, org.MeSH.Bsu.RONN1.db, org.MeSH.Bsu.TUB10.db, org.MeSH.Bsu.W23.db, org.MeSH.Bta.db, org.MeSH.Cal.SC5314.db, org.MeSH.Cbr.db, org.MeSH.Cel.db, org.MeSH.Cfa.db, org.MeSH.Cin.db, org.MeSH.Cja.db, org.MeSH.Cpo.db, org.MeSH.Cre.db, org.MeSH.Dan.db, org.MeSH.Dda.3937.db, org.MeSH.Ddi.AX4.db, org.MeSH.Der.db, org.MeSH.Dgr.db, org.MeSH.Dme.db, org.MeSH.Dmo.db, org.MeSH.Dpe.db, org.MeSH.Dre.db, org.MeSH.Dse.db, org.MeSH.Dsi.db, org.MeSH.Dvi.db, org.MeSH.Dya.db, org.MeSH.Eco.536.db, org.MeSH.Eco.55989.db, org.MeSH.Eco.APEC01.db, org.MeSH.Eco.B.REL606.db, org.MeSH.Eco.BW2952.db, org.MeSH.Eco.CFT073.db, org.MeSH.Eco.E24377A.db, org.MeSH.Eco.ED1a.db, org.MeSH.Eco.HS.db, org.MeSH.Eco.IAI1.db, org.MeSH.Eco.IAI39.db, org.MeSH.Eco.K12.DH10B.db, org.MeSH.Eco.K12.MG1655.db, org.MeSH.Eco.KO11FL.db, org.MeSH.Eco.O103.H2.12009.db, org.MeSH.Eco.O111.H.11128.db, org.MeSH.Eco.O127.H6.E2348.69.db, org.MeSH.Eco.O157.H7.EC4115.db, org.MeSH.Eco.O157.H7.EDL933.db, org.MeSH.Eco.O157.H7.Sakai.db, org.MeSH.Eco.O157.H7.TW14359.db, org.MeSH.Eco.O26.H11.11368.db, org.MeSH.Eco.O26.H7.CB9615.db, org.MeSH.Eco.S88.db, org.MeSH.Eco.SE11.db, org.MeSH.Eco.SMS35.db, org.MeSH.Eco.UMN026.db, org.MeSH.Eco.UTI89.db, org.MeSH.Eqc.db, org.MeSH.Gga.db, org.MeSH.Gma.db, org.MeSH.Hsa.db, org.MeSH.Laf.db, org.MeSH.Lma.db, org.MeSH.Mdo.db, org.MeSH.Mes.db, org.MeSH.Mga.db, org.MeSH.Miy.db, org.MeSH.Mml.db, org.MeSH.Mmu.db, org.MeSH.Mtr.db, org.MeSH.Nle.db, org.MeSH.Oan.db, org.MeSH.Ocu.db, org.MeSH.Oni.db, org.MeSH.Osa.db, org.MeSH.Pab.db, org.MeSH.Pae.LESB58.db, org.MeSH.Pae.PA14.db, org.MeSH.Pae.PA7.db, org.MeSH.Pae.PAO1.db, org.MeSH.Pfa.3D7.db, org.MeSH.Pto.db, org.MeSH.Ptr.db, org.MeSH.Rno.db, org.MeSH.Sau.COL.db, org.MeSH.Sau.ED98.db, org.MeSH.Sau.M013.db, org.MeSH.Sau.MRSA252.db, org.MeSH.Sau.MSHR1132.db, org.MeSH.Sau.MSSA476.db, org.MeSH.Sau.Mu3.db, org.MeSH.Sau.Mu50.db, org.MeSH.Sau.MW2.db, org.MeSH.Sau.N315.db, org.MeSH.Sau.Newman.db, org.MeSH.Sau.RF122.db, org.MeSH.Sau.USA300FPR3757.db, org.MeSH.Sau.USA300TCH1516.db, org.MeSH.Sau.VC40.db, org.MeSH.Sce.S288c.db, org.MeSH.Sco.A32.db, org.MeSH.Sil.db, org.MeSH.Spo.972h.db, org.MeSH.Spu.db, org.MeSH.Ssc.db, org.MeSH.Syn.db, org.MeSH.Tbr.9274.db, org.MeSH.Tgo.ME49.db, org.MeSH.Tgu.db, org.MeSH.Vvi.db, org.MeSH.Xla.db, org.MeSH.Xtr.db, org.MeSH.Zma.db, PAA, PathNet, pathview, pepXMLTab, PhenStat, proBAMr, pRolocGUI, proteoQC, qpgraph, quantro, RBGL, rBiopaxParser, Rcade, Rcpi, Rgraphviz, riboSeqR, roar, ROntoTools, rpx, RTN, rTRM, sangerseqR, SANTA, sapFinder, segmentSeq, SeqArray, seqTools, SeqVarTools, simulatorZ, SNPRelate, SpacePAC, specL, STATegRa, STRINGdb, TCC, TFBSTools, ToPASeq, trackViewer |
| Build Report |
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