To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("cghMCR")

In most cases, you don't need to download the package archive at all.

cghMCR

Find chromosome regions showing common gains/losses

Bioconductor version: 3.0

This package provides functions to identify genomic regions of interests based on segmented copy number data from multiple samples.

Author: J. Zhang and B. Feng

Maintainer: J. Zhang <jzhang at jimmy.harvard.edu>

Citation (from within R, enter citation("cghMCR")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("cghMCR")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cghMCR")

PDF	R Script	cghMCR findMCR
PDF		Reference Manual

biocViews	CopyNumberVariation, Microarray, Software
Version	1.24.0
In Bioconductor since	BioC 1.8 (R-2.3)
License	LGPL
Depends	methods, DNAcopy, CNTools, limma
Imports	BiocGenerics(>= 0.1.6), stats4
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Common Bioconductor workflows include:

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!