To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("SpacePAC")

In most cases, you don't need to download the package archive at all.

SpacePAC

Identification of Mutational Clusters in 3D Protein Space via Simulation.

Bioconductor version: 3.0

Identifies clustering of somatic mutations in proteins via a simulation approach while considering the protein's tertiary structure.

Author: Gregory Ryslik, Hongyu Zhao

Maintainer: Gregory Ryslik <gregory.ryslik at yale.edu>

Citation (from within R, enter citation("SpacePAC")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("SpacePAC")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SpacePAC")

PDF	R Script	SpacePAC: Identifying mutational clusters in 3D protein space using simulation
PDF		Reference Manual
Text		NEWS

biocViews	Clustering, Proteomics, Software
Version	1.4.0
In Bioconductor since	BioC 2.13 (R-3.0)
License	GPL-2
Depends	R (>= 2.15), iPAC
Imports
LinkingTo
Suggests	RUnit, BiocGenerics, rgl
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Common Bioconductor workflows include:

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!