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source("http://bioconductor.org/biocLite.R")
biocLite("snpStats")

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snpStats

SnpMatrix and XSnpMatrix classes and methods

Bioconductor version: 3.0

Classes and statistical methods for large SNP association studies, extending the snpMatrix package

Author: David Clayton <dc208 at cam.ac.uk>

Maintainer: David Clayton <dc208 at cam.ac.uk>

Citation (from within R, enter citation("snpStats")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("snpStats")

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browseVignettes("snpStats")

PDF	R Script	Data input
PDF	R Script	Fst
PDF	R Script	Imputation and meta-analysis
PDF	R Script	LD statistics
PDF	R Script	Principal components analysis
PDF	R Script	snpMatrix-differences
PDF	R Script	snpStats introduction
PDF	R Script	TDT tests
PDF		Reference Manual

biocViews	GeneticVariability, Microarray, SNP, Software
Version	1.16.0
In Bioconductor since	BioC 2.8 (R-2.13)
License	GPL-3
Depends	R (>= 2.10.0), survival, Matrix, methods
Imports	graphics, grDevices, stats, utils, BiocGenerics, zlibbioc
LinkingTo
Suggests	hexbin
SystemRequirements
Enhances
URL
Depends On Me	GGBase, GGdata, ggtut
Imports Me	FunciSNP, GGtools, gwascat
Suggests Me	crlmm, GWASTools, VariantAnnotation
Build Report

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