BiocGenerics

Generic functions for Bioconductor

Bioconductor version: Release (2.12)

S4 generic functions needed by many Bioconductor packages.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("BiocGenerics")

To cite this package in a publication, start R and enter:

    citation("BiocGenerics")

Documentation

PDF   Reference Manual

Details

biocViews Infrastructure, Software
Version 0.6.0
In Bioconductor since BioC 2.10 (R-2.15)
License Artistic-2.0
Depends methods, graphics, stats, parallel
Imports methods, graphics, stats, parallel
Suggests Biobase, IRanges, GenomicRanges, AnnotationDbi, oligoClasses, oligo, affyPLM, flowClust, RUnit
System Requirements
URL
Depends On Me affy, affyPLM, altcdfenvs, AnnotationDbi, AnnotationForge, beadarray, Biobase, Biostrings, BSgenome, bsseq, Category, categoryCompare, ChIPpeakAnno, chipseq, ChIPseqR, ChromHeatMap, cn.mops, codelink, copynumber, cummeRbund, dexus, easyRNASeq, EDASeq, ensemblVEP, flowQ, flowWorkspace, genomeIntervals, GenomicFeatures, GenomicRanges, Genominator, genoset, GSEABase, gwascat, htSeqTools, IRanges, KEGGSOAP, minfi, MinimumDistance, MotIV, MSnbase, nucleR, oligo, oligoClasses, PICS, PWMEnrich, R453Plus1Toolbox, REDseq, Repitools, rMAT, rsbml, ShortRead, simpleaffy, SplicingGraphs, TEQC, tigre, TSSi, VariantAnnotation, virtualArray, xcms
Imports Me affy, affyPLM, annmap, annotate, AnnotationDbi, AnnotationForge, AnnotationHub, beadarray, Biobase, biocGraph, Biostrings, biovizBase, BiSeq, Category, categoryCompare, cghMCR, ChemmineR, ChIPpeakAnno, chipseq, ChromHeatMap, cn.farms, cn.mops, codelink, crlmm, cummeRbund, curatedOvarianData, DREAM4, DrugVsDisease, EDASeq, eiR, eisa, epigenomix, fastseg, ffpe, flowClust, flowCore, flowFP, flowMerge, flowQ, flowStats, frma, gCMAP, gCMAPWeb, geNetClassifier, GenomicFeatures, GenomicRanges, GGBase, ggbio, GGtools, graph, GSEABase, GSVA, Gviz, HTSeqGenie, IRanges, KCsmart, KEGGdzPathwaysGEO, LVSmiRNA, methylumi, minfi, MinimumDistance, MiRaGE, MotifDb, MotIV, nucleR, oligo, oligoClasses, OrganismDbi, pcaMethods, PING, plrs, prada, pRoloc, QuasR, R453Plus1Toolbox, RCytoscape, REDseq, Repitools, RGalaxy, Ringo, rMAT, Rsamtools, rsbml, rtracklayer, ShortRead, simpleaffy, SLGI, snpStats, SplicingGraphs, Streamer, tigre, triform, TSSi, UniProt.ws, VariantAnnotation, VariantTools, XDE
Suggests Me bigmemoryExtras, BiocInstaller, BiocParallel, bumphunter, CAMERA, CellNOptR, ChIPpeakAnno, ChIPXpress, clipper, CNORfeeder, CNORfuzzy, ConnectivityMap, DBChIP, ensemblVEP, GENE.E, GeneNetworkBuilder, GOstats, GraphPAC, GWASTools, illuminaio, inSilicoMerging, KEGGREST, motifStack, PathNet, pathview, rBiopaxParser, Rcade, Rgraphviz, ROntoTools, SANTA

Package Downloads

Package Source BiocGenerics_0.6.0.tar.gz
Windows Binary BiocGenerics_0.6.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BiocGenerics_0.6.0.tgz
Package Downloads Report Download Stats

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