alternative CDF environments (aka probeset mappings)

Bioconductor version: Release (2.12)

Convenience data structures and functions to handle cdfenvs

Author: Laurent Gautier <lgautier at>

Maintainer: Laurent Gautier <lgautier at>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script affy primer
PDF R Script affy primer
PDF R Script altcdfenvs
PDF   Reference Manual


biocViews Annotation, Microarray, OneChannel, Preprocessing, ProprietaryPlatforms, QualityControl, Software, Transcription
Version 2.22.0
In Bioconductor since BioC 1.6 (R-1.11) or earlier
License GPL (>= 2)
Depends R (>= 2.7), methods, BiocGenerics(>= 0.1.0), Biobase(>= 2.15.1), affy, makecdfenv, Biostrings, hypergraph
Suggests plasmodiumanophelescdf, hgu95acdf, hgu133aprobe, hgu133a.db, hgu133acdf, Rgraphviz, RColorBrewer
System Requirements
Depends On Me
Imports Me Harshlight
Suggests Me

Package Downloads

Package Source altcdfenvs_2.22.0.tar.gz
Windows Binary (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) altcdfenvs_2.22.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center