geneplotter

Graphics related functions for Bioconductor

Bioconductor version: 2.8

Some basic functions for plotting genetic data

Author: R. Gentleman, Biocore

Maintainer: Biocore Team c/o BioC user list <bioconductor at stat.math.ethz.ch>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("geneplotter")

To cite this package in a publication, start R and enter:

    citation("geneplotter")

Documentation

PDF R Script How to assemble a chromLocation object
PDF R Script Visualization of Microarray Data
PDF   Reference Manual

Details

biocViews Visualization
Depends Biobase(>= 2.5.5), annotate, lattice
Imports annotate, AnnotationDbi, Biobase(>= 2.5.5), graphics, grDevices, grid, methods, RColorBrewer, stats, utils
Suggests Biobase(>= 2.5.5), Rgraphviz, annotate, fibroEset, hgu95av2.db, hu6800.db, hgu133a.db
System Requirements
License Artistic-2.0
URL
Depends On Me
Imports Me biocGraph, DESeq, flowQ, IsoGeneGUI, RNAinteract, RNAither
Suggests Me AgiMicroRna, BiocCaseStudies, biocGraph, Category, maDB
Version 1.30.0
Since Bioconductor 1.6 (R-2.1) or earlier

Package Downloads

Package Source geneplotter_1.30.0.tar.gz
Windows Binary geneplotter_1.30.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary geneplotter_1.30.0.tgz
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