DOI: 10.18129/B9.bioc.flowCore  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see flowCore.

flowCore: Basic structures for flow cytometry data

Bioconductor version: 3.17

Provides S4 data structures and basic functions to deal with flow cytometry data.

Author: B Ellis [aut], Perry Haaland [aut], Florian Hahne [aut], Nolwenn Le Meur [aut], Nishant Gopalakrishnan [aut], Josef Spidlen [aut], Mike Jiang [aut, cre], Greg Finak [aut], Samuel Granjeaud [ctb]

Maintainer: Mike Jiang <mike at ozette.com>

Citation (from within R, enter citation("flowCore")):


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PDF R Script Basic Functions for Flow Cytometry Data
HTML fcs3.html
HTML hyperlog.notice.html
PDF   Reference Manual
Text   NEWS


biocViews CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software
Version 2.12.2
In Bioconductor since BioC 2.0 (R-2.5) (16.5 years)
License Artistic-2.0
Depends R (>= 3.5.0)
Imports Biobase, BiocGenerics(>= 0.29.2), grDevices, graphics, methods, stats, utils, stats4, Rcpp, matrixStats, cytolib(>= 2.12.1), S4Vectors
LinkingTo cpp11, BH (>=, cytolib, RProtoBufLib
Suggests Rgraphviz, flowViz, flowStats(>= 3.43.4), testthat, flowWorkspace, flowWorkspaceData, openCyto, knitr, ggcyto, gridExtra
SystemRequirements GNU make, C++11
Depends On Me flowBeads, flowBin, flowClean, flowCut, flowFP, flowMatch, flowTime, flowTrans, flowViz, flowVS, ggcyto, HDCytoData, healthyFlowData, highthroughputassays, immunoClust, infinityFlow, ncdfFlow
Imports Me CATALYST, cmapR, CONFESS, cyanoFilter, cydar, CytoDx, cytofQC, cytoMEM, CytoML, CytoPipeline, ddPCRclust, diffcyt, flowAI, flowBeads, flowCHIC, flowClust, flowDensity, flowGate, flowMeans, flowMerge, flowPloidy, FlowSOM, flowSpecs, flowStats, flowTrans, flowViz, flowWorkspace, GateFinder, ImmuneSpaceR, MetaCyto, ncdfFlow, oneSENSE, openCyto, PeacoQC, scDataviz, scifer, Sconify
Suggests Me COMPASS, flowPloidyData
Links To Me
Build Report  

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Source Package flowCore_2.12.2.tar.gz
Windows Binary flowCore_2.12.2.zip (64-bit only)
macOS Binary (x86_64) flowCore_2.12.2.tgz
macOS Binary (arm64) flowCore_2.12.2.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowCore
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowCore
Bioc Package Browser https://code.bioconductor.org/browse/flowCore/
Package Short Url https://bioconductor.org/packages/flowCore/
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