flowTrans

DOI: 10.18129/B9.bioc.flowTrans  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see flowTrans.

Parameter Optimization for Flow Cytometry Data Transformation

Bioconductor version: 3.17

Profile maximum likelihood estimation of parameters for flow cytometry data transformations.

Author: Greg Finak <gfinak at fredhutch.org>, Juan Manuel-Perez <jperez at ircm.qc.ca>, Raphael Gottardo <rgottard at fredhutch.org>

Maintainer: Greg Finak <gfinak at fredhutch.org>

Citation (from within R, enter citation("flowTrans")):

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowTrans")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowTrans")

 

PDF R Script flowTrans package
PDF   Reference Manual

Details

biocViews FlowCytometry, ImmunoOncology, Software
Version 1.52.0
In Bioconductor since BioC 2.6 (R-2.11) (13.5 years)
License Artistic-2.0
Depends R (>= 2.11.0), flowCore, flowViz, flowClust
Imports flowCore, methods, flowViz, stats, flowClust
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowTrans_1.52.0.tar.gz
Windows Binary flowTrans_1.52.0.zip
macOS Binary (x86_64) flowTrans_1.52.0.tgz
macOS Binary (arm64) flowTrans_1.52.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowTrans
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowTrans
Bioc Package Browser https://code.bioconductor.org/browse/flowTrans/
Package Short Url https://bioconductor.org/packages/flowTrans/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: