DOI: 10.18129/B9.bioc.flowPloidy  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see flowPloidy.

Analyze flow cytometer data to determine sample ploidy

Bioconductor version: 3.17

Determine sample ploidy via flow cytometry histogram analysis. Reads Flow Cytometry Standard (FCS) files via the flowCore bioconductor package, and provides functions for determining the DNA ploidy of samples based on internal standards.

Author: Tyler Smith <tyler at plantarum.ca>

Maintainer: Tyler Smith <tyler at plantarum.ca>

Citation (from within R, enter citation("flowPloidy")):


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PDF R Script flowPloidy: FCM Histograms
PDF R Script flowPloidy: Getting Started
PDF   Reference Manual
Text   NEWS


biocViews FlowCytometry, GUI, Regression, Software, Visualization
Version 1.26.0
In Bioconductor since BioC 3.4 (R-3.3) (7 years)
License GPL-3
Imports flowCore, car, caTools, knitr, rmarkdown, minpack.lm, shiny, methods, graphics, stats, utils
Suggests flowPloidyData, testthat
URL https://github.com/plantarum/flowPloidy
BugReports https://github.com/plantarum/flowPloidy/issues
Depends On Me
Imports Me
Suggests Me
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Follow Installation instructions to use this package in your R session.

Source Package flowPloidy_1.26.0.tar.gz
Windows Binary flowPloidy_1.26.0.zip (64-bit only)
macOS Binary (x86_64) flowPloidy_1.26.0.tgz
macOS Binary (arm64) flowPloidy_1.26.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowPloidy
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowPloidy
Bioc Package Browser https://code.bioconductor.org/browse/flowPloidy/
Package Short Url https://bioconductor.org/packages/flowPloidy/
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