DOI: 10.18129/B9.bioc.flowCut  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see flowCut.

Automated Removal of Outlier Events and Flagging of Files Based on Time Versus Fluorescence Analysis

Bioconductor version: 3.17

Common techinical complications such as clogging can result in spurious events and fluorescence intensity shifting, flowCut is designed to detect and remove technical artifacts from your data by removing segments that show statistical differences from other segments.

Author: Justin Meskas [cre, aut], Sherrie Wang [aut]

Maintainer: Justin Meskas <justinmeskas at gmail.com>

Citation (from within R, enter citation("flowCut")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


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biocViews CellBasedAssays, FlowCytometry, Preprocessing, QualityControl, Software
Version 1.10.0
In Bioconductor since BioC 3.12 (R-4.0) (3 years)
License Artistic-2.0
Depends R (>= 3.4), flowCore
Imports flowDensity(>= 1.13.1), Cairo, e1071, grDevices, graphics, stats, methods
Suggests RUnit, BiocGenerics, knitr, markdown, rmarkdown
Depends On Me
Imports Me
Suggests Me
Links To Me
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Source Package flowCut_1.10.0.tar.gz
Windows Binary flowCut_1.10.0.zip (64-bit only)
macOS Binary (x86_64) flowCut_1.10.0.tgz
macOS Binary (arm64) flowCut_1.10.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowCut
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowCut
Bioc Package Browser https://code.bioconductor.org/browse/flowCut/
Package Short Url https://bioconductor.org/packages/flowCut/
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