Provides plotting capabilities for R graph objects

Bioconductor version: Release (2.11)

Interfaces R with the AT and T graphviz library for plotting R graph objects from the graph package. Users on all platforms must install graphviz; see the README file, available in the source distribution of this file, for details.

Author: Jeff Gentry, Li Long, Robert Gentleman, Seth Falcon, Florian Hahne, Deepayan Sarkar, Kasper Daniel Hansen

Maintainer: Kasper Daniel Hansen <khansen at jhsph.edu>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script A New Interface to Plot Graphs Using Rgraphviz
PDF R Script How To Plot A Graph Using Rgraphviz
PDF   Reference Manual
Text   NEWS


biocViews GraphsAndNetworks, NetworkVisualization, Software
Version 2.2.1
In Bioconductor since BioC 1.6 (R-2.1) or earlier
License file LICENSE
Depends R (>= 2.6.0), methods, utils, graph, grid
Imports stats4, graph, graphics, grDevices, grid, methods, utils
Suggests RUnit, BiocGenerics, XML
System Requirements Graphviz (>= 2.16)
Depends On Me biocGraph, BioMVCClass, flowMerge, GOFunction, hyperdraw, nem, netresponse, pathRender, TDARACNE
Imports Me apComplex, biocGraph, DEGraph, GeneAnswers, GOFunction, nem, RchyOptimyx
Suggests Me altcdfenvs, annotate, BiocCaseStudies, Category, CNORfuzzy, ddgraph, DEGraph, flowCore, flowMerge, flowWorkspace, GeneNetworkBuilder, geneplotter, GlobalAncova, globaltest, GOstats, GSEABase, KEGGgraph, MLP, NCIgraph, NCIgraphData, oneChannelGUI, pcaGoPromoter, pkgDepTools, RBGL, RBioinf, Rtreemix, safe, SNAData, SPIA, SRAdb, Streamer, topGO

Package Downloads

Package Source Rgraphviz_2.2.1.tar.gz
Windows Binary Rgraphviz_2.2.1.zip (32- & 64-bit)
MacOS 10.5 (Leopard) Rgraphviz_2.2.1.tgz
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