phenoTest

Tools to test correlation between gene expression and phenotype.

Bioconductor version: 2.8

Tools to test correlation between gene expression and phenotype.

Author: Evarist Planet

Maintainer: Evarist Planet <evarist.planet at irbbarcelona.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("phenoTest")

To cite this package in a publication, start R and enter:

    citation("phenoTest")

Documentation

PDF R Script Manual for the phenoTest library
PDF   Reference Manual

Details

biocViews Microarray, Bioinformatics, DifferentialExpression, MultipleComparisons, Clustering, Classification
Depends R (>= 2.9.0), Biobase, methods, annotate, Heatplus
Imports survival, limma, Hmisc, gplots, Category, AnnotationDbi, hopach, biomaRt, GSEABase, genefilter, xtable, annotate
Suggests GSEABase
System Requirements
License GPL (>=2)
URL
Depends On Me
Imports Me
Suggests Me
Version 1.0.0
Since Bioconductor 2.8 (R-2.13)

Package Downloads

Package Source phenoTest_1.0.0.tar.gz
Windows Binary phenoTest_1.0.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary phenoTest_1.0.0.tgz
Package Downloads Report Download Stats

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