To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phenoTest")

In most cases, you don't need to download the package archive at all.

phenoTest

   

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see phenoTest.

Tools to test correlation between gene expression and phenotype.

Bioconductor version: 2.8

Tools to test correlation between gene expression and phenotype.

Author: Evarist Planet

Maintainer: Evarist Planet <evarist.planet at irbbarcelona.org>

Citation (from within R, enter citation("phenoTest")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("phenoTest")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("phenoTest")

 

PDF phenoTest.pdf
PDF   Reference Manual

Details

biocViews Bioinformatics, Classification, Clustering, DifferentialExpression, Microarray, MultipleComparisons, Software
Version 1.0.0
In Bioconductor since BioC 2.8 (R-2.13) (5 years)
License GPL (>=2)
Depends R (>= 2.9.0), Biobase, methods, annotate, Heatplus
Imports survival, limma, Hmisc, gplots, Category, AnnotationDbi, hopach, biomaRt, GSEABase, genefilter, xtable, annotate
LinkingTo
Suggests GSEABase
SystemRequirements
Enhances multicore
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source phenoTest_1.0.0.tar.gz
Windows Binary phenoTest_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/phenoTest/tree/release-2.8
Package Short Url http://bioconductor.org/packages/phenoTest/
Package Downloads Report Download Stats

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