Heatplus

A heat map displaying covariates and coloring clusters

Bioconductor version: 2.8

Add an extra graphical display at the bottom of a heat map, indicating for each column a) whether it has one of several binary properties or not, and b) the value of a quantitative variable. A cutting threshold for the sample dendrogram can also be specified, and the resulting clustering of the columns is indicated by coloring both the dendrogram and the extra variable display.

Author: Alexander Ploner <Alexander.Ploner at ki.se>

Maintainer: Alexander Ploner <Alexander.Ploner at ki.se>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("Heatplus")

To cite this package in a publication, start R and enter:

    citation("Heatplus")

Documentation

PDF R Script Heatplus Introduction
PDF   Reference Manual

Details

biocViews Microarray, Visualization
Depends
Imports graphics, grDevices, stats
Suggests
System Requirements
License GPL (>= 2)
URL
Depends On Me GeneAnswers, phenoTest
Imports Me
Suggests Me
Version 1.22.0
Since Bioconductor 1.8 (R-2.3)

Package Downloads

Package Source Heatplus_1.22.0.tar.gz
Windows Binary Heatplus_1.22.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary Heatplus_1.22.0.tgz
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