To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GSEABase")

In most cases, you don't need to download the package archive at all.

GSEABase

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see GSEABase.

Gene set enrichment data structures and methods

Bioconductor version: 2.8

This package provides classes and methods to support Gene Set Enrichment Analysis (GSEA).

Author: Martin Morgan, Seth Falcon, Robert Gentleman

Maintainer: Biocore Team c/o BioC user list <bioconductor at stat.math.ethz.ch>

Citation (from within R, enter citation("GSEABase")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GSEABase")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GSEABase")

PDF		GSEABase.pdf
PDF		Reference Manual

biocViews	Bioinformatics, Infrastructure, Software
Version	1.14.0
In Bioconductor since	BioC 2.1 (R-2.6) (8.5 years)
License	Artistic-2.0
Depends	R (>= 2.6.0), Biobase, annotate, methods, graph
Imports	annotate, AnnotationDbi, Biobase, graph, methods, XML
LinkingTo
Suggests	hgu95av2.db, GO.db, org.Hs.eg.db
SystemRequirements
Enhances
URL
Depends On Me	BicARE, GSVAdata, HTSanalyzeR, PROMISE
Imports Me	Category, cellHTS2, GGtools, GSRI, GSVA, HTSanalyzeR, PCpheno, phenoTest, PROMISE
Suggests Me	BiocCaseStudies, gage, GGtools, GlobalAncova, globaltest, GSEAlm, PGSEA, phenoTest
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	GSEABase_1.14.0.tar.gz
Windows Binary	GSEABase_1.14.0.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/GSEABase/tree/release-2.8
Package Short Url	http://bioconductor.org/packages/GSEABase/
Package Downloads Report	Download Stats

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