GSEAlm

Linear Model Toolset for Gene Set Enrichment Analysis

Bioconductor version: 2.8

Models and methods for fitting linear models to gene expression data, together with tools for computing and using various regression diagnostics.

Author: Assaf Oron, Robert Gentleman (with contributions from S. Falcon and Z. Jiang)

Maintainer: Assaf Oron <assaf at uw.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("GSEAlm")

To cite this package in a publication, start R and enter:

    citation("GSEAlm")

Documentation

PDF R Script Linear models in GSEA
PDF   Reference Manual

Details

biocViews Microarray, Bioinformatics
Depends Biobase
Imports
Suggests GSEABase, Category, multtest, ALL, annotate, hgu95av2.db, genefilter, GOstats, RColorBrewer
System Requirements
License Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me
Version 1.12.0
Since Bioconductor 2.2 (R-2.7)

Package Downloads

Package Source GSEAlm_1.12.0.tar.gz
Windows Binary GSEAlm_1.12.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary GSEAlm_1.12.0.tgz
Package Downloads Report Download Stats

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