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DOI: 10.18129/B9.bioc.BiocParallel    

Bioconductor facilities for parallel evaluation

Bioconductor version: Release (3.5)

This package provides modified versions and novel implementation of functions for parallel evaluation, tailored to use with Bioconductor objects.

Author: Bioconductor Package Maintainer [cre], Martin Morgan [aut], Valerie Obenchain [aut], Michel Lang [aut], Ryan Thompson [aut]

Maintainer: Bioconductor Package Maintainer <maintainer at>

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PDF R Script 1. Introduction to BiocParallel
PDF R Script 2. Errors, Logs and Debugging
PDF   Reference Manual
Text   NEWS


biocViews Infrastructure, Software
Version 1.10.1
In Bioconductor since BioC 2.13 (R-3.0) (4 years)
License GPL-2 | GPL-3
Depends methods
Imports stats, utils, futile.logger, parallel, snow
Suggests BiocGenerics, tools, foreach, BatchJobs, BBmisc, doParallel, Rmpi, GenomicRanges, RNAseqData.HNRNPC.bam.chr14, Rsamtools, GenomicAlignments, ShortRead, codetools, RUnit, BiocStyle, knitr
Depends On Me bacon, ClassifyR, clusterSeq, consensusSeekeR, CopywriteR, csaw, cydar, DEXSeq, doppelgangR, GenomicFiles, hiReadsProcessor, INSPEcT, MBASED, metagene, MSnbase, Oscope, PCAN, pRoloc, Rqc, scran, ShortRead, SigCheck, STROMA4, sva, xcms
Imports Me ALDEx2, cellbaseR, ChIPexoQual, ChIPQC, contiBAIT, coseq, cpvSNP, CRISPRseek, CrispRVariants, dcGSA, derfinder, DESeq2, DiffBind, DOSE, DRIMSeq, easyRNASeq, EMDomics, fgsea, FindMyFriends, flowcatchR, GenoGAM, GenomicAlignments, genotypeeval, gmapR, GUIDEseq, h5vc, HTSeqGenie, HTSFilter, ideal, IHWpaper, IMAS, ImpulseDE2, InPAS, IntEREst, IONiseR, IPO, IVAS, JunctionSeq, LowMACA, MCbiclust, metabomxtr, MethylAid, methylInheritance, MIGSA, motifbreakR, Pbase, pbcmc, proFIA, QDNAseq, qpgraph, qsea, QuasR, recount, REMP, RJMCMCNucleosomes, Rsamtools, RUVcorr, scDD, scde, scone, SNPhood, soGGi, splatter, TarSeqQC, TFBSTools, TSRchitect, TVTB, Uniquorn, VariantFiltering, VariantTools
Suggests Me chimera, curatedMetagenomicData, DEGreport, erma, MethylAidData, oneChannelGUI, SeqArray, systemPipeR, tofsims
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