- Home
- Bioconductor 3.4
- Experiment Packages
- curatedOvarianData
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("curatedOvarianData")
In most cases, you don't need to download the package archive at all.
curatedOvarianData
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see curatedOvarianData.
Clinically Annotated Data for the Ovarian Cancer Transcriptome
Bioconductor version: 3.4
The curatedOvarianData package provides data for gene expression analysis in patients with ovarian cancer.
Author: Benjamin F. Ganzfried, Markus Riester, Steve Skates, Victoria Wang, Thomas Risch, Benjamin Haibe-Kains, Svitlana Tyekucheva, Jie Ding, Ina Jazic, Michael Birrer, Giovanni Parmigiani, Curtis Huttenhower, Levi Waldron
Maintainer: Levi Waldron <lwaldron.research at gmail.com>
Citation (from within R,
enter citation("curatedOvarianData")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("curatedOvarianData")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("curatedOvarianData")
| R Script | curatedOvarianData_vignette.pdf | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | CancerData, ExperimentData, MicroarrayData, OvarianCancerData, RNASeqData |
| Version | 1.12.0 |
| License | Artistic-2.0 |
| Depends | R (>= 2.10.0), affy |
| Imports | BiocGenerics |
| LinkingTo | |
| Suggests | survival, RUnit, metafor, genefilter, logging, sva, xtable, futile.logger, BiocStyle |
| SystemRequirements | |
| Enhances | |
| URL | http://bcb.dfci.harvard.edu/ovariancancer |
| Depends On Me | |
| Imports Me | |
| Suggests Me | ClassifyR, doppelgangR, simulatorZ |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | curatedOvarianData_1.12.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/curatedOvarianData/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
