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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("simulatorZ")
In most cases, you don't need to download the package archive at all.
simulatorZ
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see simulatorZ.
Simulator for Collections of Independent Genomic Data Sets
Bioconductor version: 3.4
simulatorZ is a package intended primarily to simulate collections of independent genomic data sets, as well as performing training and validation with predicting algorithms. It supports ExpressionSet and RangedSummarizedExperiment objects.
Author: Yuqing Zhang, Christoph Bernau, Levi Waldron
Maintainer: Yuqing Zhang <zhangyuqing.pkusms at gmail.com>
Citation (from within R,
enter citation("simulatorZ")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("simulatorZ")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("simulatorZ")
| R Script | SimulatorZ | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Software, Survival |
| Version | 1.8.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (2.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 3.1), methods, BiocGenerics, Biobase, SummarizedExperiment, survival, CoxBoost |
| Imports | graphics, stats, gbm, Hmisc, S4Vectors, IRanges, GenomicRanges |
| LinkingTo | |
| Suggests | RUnit, BiocStyle, curatedOvarianData, parathyroidSE, superpc |
| SystemRequirements | |
| Enhances | |
| URL | https://github.com/zhangyuqing/simulatorZ |
| BugReports | https://github.com/zhangyuqing/simulatorZ |
| Depends On Me | |
| Imports Me | |
| Suggests Me | doppelgangR |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | simulatorZ_1.8.0.tar.gz |
| Windows Binary | simulatorZ_1.8.0.zip (32- & 64-bit) |
| Mac OS X 10.9 (Mavericks) | simulatorZ_1.8.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/simulatorZ/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/simulatorZ/ |
| Package Downloads Report | Download Stats |
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