To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("ABAData")
In most cases, you don't need to download the package archive at all.
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see ABAData.
Bioconductor version: 3.4
Provides the data for the gene expression enrichment analysis conducted in the package 'ABAEnrichment'. The package includes three datasets which are derived from the Allen Brain Atlas: (1) Gene expression data from Human Brain (adults) averaged across donors, (2) Gene expression data from the Developing Human Brain pooled into five age categories and averaged across donors and (3) a developmental effect score based on the Developing Human Brain expression data. All datasets are restricted to protein coding genes.
Author: Steffi Grote
Maintainer: Steffi Grote <steffi_grote at eva.mpg.de>
Citation (from within R,
enter citation("ABAData")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("ABAData")
HTML | R Script | ABAData: gene expression data to use with enrichment analysis package ABAEnrichment |
Reference Manual |
biocViews | ExperimentData, ExpressionData, Homo_sapiens_Data, MicroarrayData, RNASeqData |
Version | 1.4.0 |
License | GPL (>= 2) |
Depends | R (>= 3.2) |
Imports | |
LinkingTo | |
Suggests | BiocStyle, knitr |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | ABAEnrichment |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | ABAData_1.4.0.tar.gz |
Windows Binary | |
Mac OS X 10.9 (Mavericks) | |
Subversion source | (username/password: readonly) |
Package Short Url | http://bioconductor.org/packages/ABAData/ |
Package Downloads Report | Download Stats |
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