To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Hsapiens.UCSC.hg19")

In most cases, you don't need to download the package archive at all.

BSgenome.Hsapiens.UCSC.hg19

Full genome sequences for Homo sapiens (UCSC version hg19)

Bioconductor version: 3.0

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg19, Feb. 2009) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Hsapiens.UCSC.hg19")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Hsapiens.UCSC.hg19")


PDF		Reference Manual

biocViews	AnnotationData, BSgenome, Genetics, Homo_sapiens
Version	1.4.0
License	Artistic-2.0
Depends	BSgenome(>= 1.33.5)
Imports	BSgenome
LinkingTo
Suggests	TxDb.Hsapiens.UCSC.hg19.knownGene
SystemRequirements
Enhances
URL
Depends On Me	BSgenome.Hsapiens.UCSC.hg19.masked, chimera, motifRG
Imports Me	BSgenome.Hsapiens.UCSC.hg19.masked, VariantFiltering
Suggests Me	ArrayTV, Basic4Cseq, biovizBase, BSgenome, CRISPRseek, customProDB, FDb.FANTOM4.promoters.hg19, FDb.UCSC.snp135common.hg19, FDb.UCSC.snp137common.hg19, GenomicAlignments, GenomicFeatures, GenomicInteractions, GenomicRanges, ggbio, gmapR, Gviz, h5vc, MEDIPS, MiRaGE, oneChannelGUI, Pbase, R453Plus1Toolbox, Rariant, rGADEM, Rsamtools, RSVSim, rtracklayer, SNPlocs.Hsapiens.dbSNP.20100427, SNPlocs.Hsapiens.dbSNP.20101109, SNPlocs.Hsapiens.dbSNP.20110815, SNPlocs.Hsapiens.dbSNP.20111119, SNPlocs.Hsapiens.dbSNP.20120608, SomaticSignatures, spliceR, VariantAnnotation, wavClusteR

Follow Installation instructions to use this package in your R session.

Package Source	BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz
Windows Binary	BSgenome.Hsapiens.UCSC.hg19_1.4.0.zip
Mac OS X 10.6 (Snow Leopard)	BSgenome.Hsapiens.UCSC.hg19_1.4.0.tgz
Mac OS X 10.9 (Mavericks)	BSgenome.Hsapiens.UCSC.hg19_1.4.0.tgz
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