Gene set enrichment data structures and methods

Bioconductor version: 2.9

This package provides classes and methods to support Gene Set Enrichment Analysis (GSEA).

Author: Martin Morgan, Seth Falcon, Robert Gentleman

Maintainer: Bioconductor Package Maintainer <maintainer at>

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PDF R Script An introduction to GSEABase
PDF   Reference Manual
Text   NEWS


biocViews Infrastructure, Bioinformatics
Depends R (>= 2.6.0), Biobase, annotate, methods, graph
Imports annotate, AnnotationDbi, Biobase, graph, methods, XML
Suggests hgu95av2.db, GO.db,
System Requirements
License Artistic-2.0
Depends On Me AGDEX, BicARE, GSVAdata, HTSanalyzeR, PROMISE
Imports Me Category, cellHTS2, GSRI, GSVA, HTSanalyzeR, PCpheno, phenoTest, PROMISE
Suggests Me BiocCaseStudies, gage, GlobalAncova, globaltest, GSEAlm, PGSEA, phenoTest
Version 1.16.1
Since Bioconductor 2.1 (R-2.6)

Package Downloads

Package Source GSEABase_1.16.1.tar.gz
Windows Binary (32- & 64-bit)
MacOS 10.5 (Leopard) binary GSEABase_1.16.1.tgz
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