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Category Analysis

Bioconductor version: 2.14

A collection of tools for performing category analysis.

Author: R. Gentleman with contributions from S. Falcon and D.Sarkar

Maintainer: Bioconductor Package Maintainer <maintainer at>

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PDF R Script Using Categories to Analyze Microarray Data
PDF R Script Using Chromosome Bands as Categories
PDF   Reference Manual
Text   NEWS


biocViews Annotation, GO, GeneSetEnrichment, Pathways, Software
Version 2.30.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier
License Artistic-2.0
Depends BiocGenerics, AnnotationDbi, Biobase, Matrix, GO.db, methods
Imports BiocGenerics, graph, methods, Biobase, AnnotationDbi, RBGL, GSEABase(>= 1.19.3), genefilter, annotate(>= 1.15.6), stats, utils
Suggests EBarrays, ALL, Rgraphviz, RColorBrewer, xtable (>= 1.4-6), hgu95av2.db, KEGG.db, SNPchip, geneplotter, limma, lattice, graph, Biobase, genefilter, methods, RUnit, org.Sc.sgd.db, GOstats
System Requirements
Depends On Me GOstats, meshr, PCpheno
Imports Me categoryCompare, cellHTS2, eisa, gCMAP, GOstats, interactiveDisplay, PCpheno, phenoTest, ppiStats, RDAVIDWebService, ReportingTools
Suggests Me BiocCaseStudies, cellHTS, GSEAlm, MmPalateMiRNA

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Package Source Category_2.30.0.tar.gz
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Mac OS X 10.6 (Snow Leopard) Category_2.30.0.tgz
Mac OS X 10.9 (Mavericks) Category_2.30.0.tgz
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