To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Category")

In most cases, you don't need to download the package archive at all.

Category

Category Analysis

Bioconductor version: 2.14

A collection of tools for performing category analysis.

Author: R. Gentleman with contributions from S. Falcon and D.Sarkar

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("Category")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Category")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Category")

PDF	R Script	Using Categories to Analyze Microarray Data
PDF	R Script	Using Chromosome Bands as Categories
PDF		Reference Manual
Text		NEWS

biocViews	Annotation, GO, GeneSetEnrichment, Pathways, Software
Version	2.30.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier
License	Artistic-2.0
Depends	BiocGenerics, AnnotationDbi, Biobase, Matrix, GO.db, methods
Imports	BiocGenerics, graph, methods, Biobase, AnnotationDbi, RBGL, GSEABase(>= 1.19.3), genefilter, annotate(>= 1.15.6), stats, utils
Suggests	EBarrays, ALL, Rgraphviz, RColorBrewer, xtable (>= 1.4-6), hgu95av2.db, KEGG.db, SNPchip, geneplotter, limma, lattice, graph, Biobase, genefilter, methods, RUnit, org.Sc.sgd.db, GOstats
System Requirements
URL
Depends On Me	GOstats, meshr, PCpheno
Imports Me	categoryCompare, cellHTS2, eisa, gCMAP, GOstats, interactiveDisplay, PCpheno, phenoTest, ppiStats, RDAVIDWebService, ReportingTools
Suggests Me	BiocCaseStudies, cellHTS, GSEAlm, MmPalateMiRNA

Follow Installation instructions to use this package in your R session.

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