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Visualizations for copy number alterations

Bioconductor version: 2.14

This package defines methods for visualizing high-throughput genomic data

Author: Robert Scharpf <rscharpf at> and Ingo Ruczinski

Maintainer: Robert Scharpf <rscharpf at>

Citation (from within R, enter citation("SNPchip")):


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PDF R Script Plotting Idiograms
PDF   Reference Manual


biocViews CopyNumberVariation, GeneticVariability, SNP, Software, Visualization
Version 2.10.0
In Bioconductor since BioC 2.0 (R-2.5)
License LGPL (>= 2)
Depends R (>= 2.14.0)
Imports graphics, lattice, grid, foreach, utils, methods, oligoClasses(>= 1.21.12), Biobase, GenomicRanges
Suggests crlmm(>= 1.17.14), IRanges, RUnit
System Requirements
Depends On Me mBPCR
Imports Me crlmm, phenoTest
Suggests Me Category, MinimumDistance, oligoClasses, VanillaICE

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