GGdata

all 90 hapmap CEU samples, 47K expression, 4mm SNP

Bioconductor version: 2.8

data exemplars dealing with hapmap SNP reports, GWAS, etc.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("GGdata")

To cite this package in a publication, start R and enter:

    citation("GGdata")

Documentation

PDF   Reference Manual

Details

biocViews ExperimentData, HapMap
Depends R (>= 2.12.0), methods, Biobase(>= 2.5.5), GGBase, snpStats, illuminaHumanv1.db, AnnotationDbi
Imports
Suggests
System Requirements
License LGPL
URL
Depends On Me
Imports Me
Suggests Me encoDnaseI
Version 1.0.16

Package Downloads

Package Source GGdata_1.0.16.tar.gz
Windows Binary GGdata_1.0.16.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary GGdata_1.0.16.tgz
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:

 

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center