affyio

Tools for parsing Affymetrix data files

Bioconductor version: 2.8

Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.

Author: Benjamin Milo Bolstad <bmb at bmbolstad.com>

Maintainer: Benjamin Milo Bolstad <bmb at bmbolstad.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("affyio")

To cite this package in a publication, start R and enter:

    citation("affyio")

Documentation

PDF   Reference Manual

Details

biocViews Microarray, DataImport, Infrastructure
Depends R (>= 2.6.0), methods
Imports
Suggests
System Requirements
License LGPL (>= 2)
URL
Depends On Me affylmGUI, sscore
Imports Me affy, crlmm, gcrma, makePlatformDesign, oligo, oligoClasses
Suggests Me BufferedMatrixMethods
Version 1.20.0
Since Bioconductor 1.8 (R-2.3)

Package Downloads

Package Source affyio_1.20.0.tar.gz
Windows Binary affyio_1.20.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary affyio_1.20.0.tgz
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