sscore

S-Score Algorithm for Affymetrix Oligonucleotide Microarrays

Bioconductor version: 2.8

This package contains an implementation of the S-Score algorithm as described by Zhang et al (2002).

Author: Richard Kennedy <rkennedy at ms.soph.uab.edu>, based on C++ code from Li Zhang <zhangli at odin.mdacc.tmc.edu> and Borland Delphi code from Robnet Kerns <rtkerns at vcu.edu>.

Maintainer: Richard Kennedy <rkennedy at ms.soph.uab.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("sscore")

To cite this package in a publication, start R and enter:

    citation("sscore")

Documentation

PDF R Script SScore primer
PDF   Reference Manual

Details

biocViews Bioinformatics, DifferentialExpression
Depends R (>= 1.8.0), affy, affyio
Imports
Suggests affydata
System Requirements
License GPL (>= 2)
URL http://home.att.net/~richard-kennedy/professional.html
Depends On Me
Imports Me
Suggests Me
Version 1.24.0
Since Bioconductor 1.8 (R-2.3)

Package Downloads

Package Source sscore_1.24.0.tar.gz
Windows Binary sscore_1.24.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary sscore_1.24.0.tgz
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