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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("HelloRangesData")
In most cases, you don't need to download the package archive at all.
HelloRangesData
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see HelloRangesData.
Data for the HelloRanges tutorial vignette
Bioconductor version: 3.4
Provides the data that were used in the bedtools tutorial by Aaron Quinlan (http://quinlanlab.org/tutorials/bedtools/bedtools.html). Includes a subset of the DnaseI hypersensitivity data from "Maurano et al. Systematic Localization of Common Disease-Associated Variation in Regulatory DNA. Science. 2012. Vol. 337 no. 6099 pp. 1190-1195." The rest of the tracks were originally downloaded from the UCSC table browser. See the HelloRanges vignette for a port of the bedtools tutorial to R.
Author: Michael Lawrence
Maintainer: Michael Lawrence <michafla at gene.com>
Citation (from within R,
enter citation("HelloRangesData")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("HelloRangesData")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HelloRangesData")
| R Script | HelloRanges Example Data | |
| Reference Manual |
Details
| biocViews | ExperimentData, SequencingData |
| Version | 1.0.0 |
| License | GPL (>= 2) |
| Depends | |
| Imports | |
| LinkingTo | |
| Suggests | BiocStyle |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | HelloRanges |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | HelloRangesData_1.0.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/HelloRangesData/ |
| Package Downloads Report | Download Stats |
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