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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GSE62944")
In most cases, you don't need to download the package archive at all.
GSE62944
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see GSE62944.
GEO accession data GSE62944 as a SummarizedExperiment
Bioconductor version: 3.4
TCGA processed RNA-Seq data for 9264 tumor and 741 normal samples across 24 cancer types and made them available as GEO accession [GSE62944](http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE62944). GSE62944 data have been parsed into a SummarizedExperiment object available in ExperimentHub.
Author: Sonali Arora
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R,
enter citation("GSE62944")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GSE62944")
Documentation
| HTML | R Script | Raw TCGA data using Bioconductor's ExperimentHub |
| Reference Manual |
Details
| biocViews | DNASeqData, ExperimentData, Genome, RNASeqData |
| Version | 1.2.0 |
| License | Artistic-2.0 |
| Depends | Biobase, GEOquery |
| Imports | |
| LinkingTo | |
| Suggests | ExperimentHub(>= 0.99.6), knitr, BiocStyle |
| SystemRequirements | |
| Enhances | |
| URL | http://bioconductor.org/packages/release/bioc/html/GSE62944.html |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | GSE62944_1.2.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/GSE62944/ |
| Package Downloads Report | Download Stats |
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