To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("beadarraySNP")

In most cases, you don't need to download the package archive at all.

beadarraySNP

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see beadarraySNP.

Normalization and reporting of Illumina SNP bead arrays

Bioconductor version: 2.8

Importing data from Illumina SNP experiments and performing copy number calculations and reports.

Author: Jan Oosting

Maintainer: Jan Oosting <j.oosting at lumc.nl>

Citation (from within R, enter citation("beadarraySNP")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("beadarraySNP")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("beadarraySNP")

PDF		beadarraySNP.pdf
PDF		Reference Manual

biocViews	CopyNumberVariants, DataImport, GeneticVariability, Preprocessing, SNP, Software, TwoChannel
Version	1.18.0
In Bioconductor since	BioC 1.9 (R-2.4) (9.5 years)
License	GPL-2
Depends	methods, Biobase(>= 2.5.5), quantsmooth
Imports
LinkingTo
Suggests	aCGH, affy, limma, snapCGH, beadarray, DNAcopy
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	beadarraySNP_1.18.0.tar.gz
Windows Binary	beadarraySNP_1.18.0.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/beadarraySNP/tree/release-2.8
Package Short Url	http://bioconductor.org/packages/beadarraySNP/
Package Downloads Report	Download Stats

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