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Segmentation, normalisation and processing of aCGH data.

Bioconductor version: 2.14

Methods for segmenting, normalising and processing aCGH data; including plotting functions for visualising raw and segmented data for individual and multiple arrays.

Author: Mike L. Smith, John C. Marioni, Steven McKinney, Thomas Hardcastle, Natalie P. Thorne

Maintainer: John Marioni <marioni at>

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PDF R Script Segmentation Overview
PDF   Reference Manual


biocViews CopyNumberVariation, Microarray, Preprocessing, Software, TwoChannel
Version 1.34.0
In Bioconductor since BioC 1.8 (R-2.3)
License GPL
Depends limma, DNAcopy, methods
Imports aCGH, cluster, DNAcopy, GLAD, graphics, grDevices, limma, methods, stats, tilingArray, utils
System Requirements
Depends On Me
Imports Me ADaCGH2
Suggests Me beadarraySNP

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Package Source snapCGH_1.34.0.tar.gz
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Mac OS X 10.6 (Snow Leopard) snapCGH_1.34.0.tgz
Mac OS X 10.9 (Mavericks) snapCGH_1.34.0.tgz
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