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A package for de novo CNV detection in case-parent trios

Bioconductor version: 2.14

Analysis of de novo copy number variants in trios from high-dimensional genotyping platforms

Author: Robert B Scharpf and Ingo Ruczinski

Maintainer: Robert B Scharpf <rscharpf at>

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PDF R Script Detection of de novo copy number alterations in case-parent trios
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biocViews CopyNumberVariation, Microarray, SNP, Software
Version 1.8.1
In Bioconductor since BioC 2.10 (R-2.15)
License Artistic-2.0
Depends R (>= 3.01)
Imports methods, DNAcopy, utils, msm, lattice, BiocGenerics, VanillaICE(>= 1.26.1), ff, Biobase(>= 2.23.6), foreach, oligoClasses(>= 1.24.0), IRanges, GenomicRanges, matrixStats
Suggests human610quadv1bCrlmm(>= 1.0.3), SNPchip, RUnit
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Depends On Me
Imports Me
Suggests Me

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