To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MotifDb")

In most cases, you don't need to download the package archive at all.

MotifDb

An Annotated Collection of Protein-DNA Binding Sequence Motifs

Bioconductor version: 2.14

More than 2000 annotated position frequency matrices from five public source, for multiple organisms

Author: Paul Shannon

Maintainer: Paul Shannon <pshannon at fhcrc.org>

Citation (from within R, enter citation("MotifDb")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MotifDb")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MotifDb")

biocViews	GenomicSequence, MotifAnnotation, Software
Version	1.6.0
In Bioconductor since	BioC 2.11 (R-2.15)
License	Artistic-2.0 \| file LICENSE
Depends	R (>= 2.15.0), methods, IRanges, Biostrings
Imports	BiocGenerics, rtracklayer
Suggests	RUnit, MotIV, seqLogo
System Requirements
URL
Depends On Me
Imports Me	rTRMui
Suggests Me	motifStack, PWMEnrich, rTRM, vtpnet

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