source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Hsapiens.UCSC.hg19")

BSgenome.Hsapiens.UCSC.hg19

Homo sapiens (Human) full genome (UCSC version hg19)

Bioconductor version: 2.13

Homo sapiens (Human) full genome as provided by UCSC (hg19, Feb. 2009) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Hsapiens.UCSC.hg19")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BSgenome.Hsapiens.UCSC.hg19")

 

PDF		Reference Manual

Details

biocViews	AnnotationData, Genetics, Homo_sapiens
Version	1.3.19
License	Artistic-2.0
Depends	BSgenome(>= 1.25.4)
Imports	BSgenome
Suggests
System Requirements
URL
Depends On Me	chimera, FDb.InfiniumMethylation.hg19, motifRG
Imports Me
Suggests Me	ArrayTV, biovizBase, BSgenome, customProDB, FDb.FANTOM4.promoters.hg19, FDb.UCSC.snp135common.hg19, FDb.UCSC.snp137common.hg19, GenomicFeatures, GenomicRanges, ggbio, gmapR, Gviz, h5vc, MEDIPS, MiRaGE, oneChannelGUI, r3Cseq, R453Plus1Toolbox, Rsamtools, RSVSim, rtracklayer, SNPlocs.Hsapiens.dbSNP.20100427, SNPlocs.Hsapiens.dbSNP.20101109, SNPlocs.Hsapiens.dbSNP.20110815, SNPlocs.Hsapiens.dbSNP.20111119, SNPlocs.Hsapiens.dbSNP.20120608, spliceR, VariantAnnotation

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	BSgenome.Hsapiens.UCSC.hg19_1.3.19.tar.gz
Windows Binary	BSgenome.Hsapiens.UCSC.hg19_1.3.19.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	BSgenome.Hsapiens.UCSC.hg19_1.3.19.tgz
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