source("http://bioconductor.org/biocLite.R")
biocLite("rTRMui")

rTRMui

A shiny user interface for rTRM

Bioconductor version: 2.13

This package provides a web interface to compute transcriptional regulatory modules with rTRM.

Author: Diego Diez

Maintainer: Diego Diez <diego10ruiz at gmail.com>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("rTRMui")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rTRMui")

 

PDF	R Script	Introduction to rTRMui
PDF		Reference Manual
Text		NEWS

Details

biocViews	GUI, GeneRegulation, GraphsAndNetworks, NetworkAnalysis, Software, Transcription
Version	1.0.4
In Bioconductor since	BioC 2.13 (R-3.0)
License	GPL-3
Depends	shiny (>= 0.5), rTRM, MotifDb, org.Hs.eg.db, org.Mm.eg.db
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	rTRMui_1.0.4.tar.gz
Windows Binary	rTRMui_1.0.4.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	rTRMui_1.0.4.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats