source("http://bioconductor.org/biocLite.R")
biocLite("qcmetrics")

qcmetrics

A Framework for Quality Control

Bioconductor version: 2.13

The package provides a framework for generic quality control of data. It permits to create, manage and visualise individual or sets of quality control metrics and generate quality control reports in various formats.

Author: Laurent Gatto

Maintainer: Laurent Gatto <lg390 at cam.ac.uk>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("qcmetrics")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("qcmetrics")

 

PDF	R Script	The 'qcmetrics' infrastructure for quality control and reporting
PDF		Reference Manual
Text		NEWS

Details

biocViews	Bioinformatics, MassSpectrometry, Microarray, Proteomics, QualityControl, Software, Visualisation
Version	1.0.0
In Bioconductor since	BioC 2.13 (R-3.0)
License	GPL-2
Depends	R (>= 2.10)
Imports	Biobase, methods, knitr, tools, Nozzle.R1, xtable, pander
Suggests	affy, MSnbase, ggplot2, lattice, yaqcaffy, MAQCsubsetAFX, RforProteomics, AnnotationDbi, mzR, hgu133plus2cdf
System Requirements
URL	https://github.com/lgatto/qcmetrics
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	qcmetrics_1.0.0.tar.gz
Windows Binary	qcmetrics_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	qcmetrics_1.0.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats