source("http://bioconductor.org/biocLite.R")
biocLite("plrs")

plrs

Piecewise Linear Regression Splines (PLRS) for the association between DNA copy number and gene expression

Bioconductor version: 2.13

The present package implements a flexible framework for modeling the relationship between DNA copy number and gene expression data using Piecewise Linear Regression Splines (PLRS).

Author: Gwenael G.R. Leday

Maintainer: Gwenael G.R. Leday to <gleday at few.vu.nl>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("plrs")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("plrs")

 

PDF	R Script	plrs
PDF		Reference Manual

Details

biocViews	Software
Version	1.2.0
In Bioconductor since	BioC 2.12 (R-3.0)
License	GPL (>=2.0)
Depends	R (>= 2.10), Biobase
Imports	BiocGenerics, CGHbase, graphics, grDevices, ic.infer, marray, methods, quadprog, Rcsdp, stats, stats4, utils
Suggests	mvtnorm, methods
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	plrs_1.2.0.tar.gz
Windows Binary	plrs_1.2.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	plrs_1.2.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats