source("http://bioconductor.org/biocLite.R")
biocLite("mBPCR")

mBPCR

Bayesian Piecewise Constant Regression for DNA copy number estimation

Bioconductor version: 2.13

Estimates the DNA copy number profile using mBPCR to detect regions with copy number changes

Author: P.M.V. Rancoita <paola.rancoita at gmail.com>, with contributions from M. Hutter <marcus.hutter at anu.edu.au>

Maintainer: P.M.V. Rancoita <paola.rancoita at gmail.com>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("mBPCR")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mBPCR")

 

PDF	R Script	mBPCR
PDF		Reference Manual

Details

biocViews	Bioinformatics, CopyNumberVariants, Microarray, SNP, Software, aCGH
Version	1.16.0
In Bioconductor since	BioC 2.5 (R-2.10)
License	GPL (>= 2)
Depends	oligoClasses, SNPchip
Imports	Biobase
Suggests	xtable
System Requirements
URL	http://www.idsia.ch/~paola/mBPCR
Depends On Me
Imports Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	mBPCR_1.16.0.tar.gz
Windows Binary	mBPCR_1.16.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	mBPCR_1.16.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats