source("http://bioconductor.org/biocLite.R")
biocLite("PICS")

PICS

Probabilistic inference of ChIP-seq

Bioconductor version: 2.13

Probabilistic inference of ChIP-Seq using an empirical Bayes mixture model approach.

Author: Xuekui Zhang <xzhang at stat.ubc.ca>, Raphael Gottardo <rgottard at fhcrc.org>

Maintainer: Renan Sauteraud <rsautera at fhcrc.org>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("PICS")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PICS")

 

PDF	R Script	The PICS users guide
PDF		Reference Manual
Text		NEWS

Details

biocViews	ChIPseq, Clustering, Sequencing, Software, Visualization
Version	2.6.0
In Bioconductor since	BioC 2.6 (R-2.11)
License	Artistic-2.0
Depends	R (>= 2.14.0), BiocGenerics(>= 0.1.3)
Imports	methods, stats4, IRanges, GenomicRanges, graphics, grDevices, stats, Rsamtools
Suggests	ShortRead, rtracklayer, parallel
System Requirements
URL
Depends On Me
Imports Me	PING
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	PICS_2.6.0.tar.gz
Windows Binary	PICS_2.6.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	PICS_2.6.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats