LungCancerLines

Reads from Two Lung Cancer Cell Lines

Bioconductor version: Release (2.11)

Reads from an RNA-seq experiment between two lung cancer cell lines: H1993 (met) and H2073 (primary). The reads are stored as Fastq files and are meant for use with the TP53Genome object in the gmapR package.

Author: Cory Barr, Michael Lawrence

Maintainer: Cory Barr <barr.cory at gene.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("LungCancerLines")

To cite this package in a publication, start R and enter:

    citation("LungCancerLines")

Documentation

PDF   Reference Manual

Details

biocViews ExperimentData
Version 0.0.7
License Artistic-2.0
Depends
Imports Rsamtools
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me gmapR, HTSeqGenie, VariantTools

Package Downloads

Package Source LungCancerLines_0.0.7.tar.gz
Windows Binary LungCancerLines_0.0.7.zip (32- & 64-bit)
MacOS 10.5 (Leopard) LungCancerLines_0.0.7.tgz
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Fred Hutchinson Cancer Research Center