Visualizations for copy number alterations

Bioconductor version: Release (2.11)

This package defines methods for visualizing high-throughput genomic data

Author: Robert Scharpf <rscharpf at> and Ingo Ruczinski

Maintainer: Robert Scharpf <rscharpf at>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script Plotting Idiograms
PDF   Reference Manual


biocViews CopyNumberVariants, GeneticVariability, SNP, Software, Visualization
Version 2.4.0
In Bioconductor since BioC 2.0 (R-2.5)
License LGPL (>= 2)
Depends R (>= 2.14.0)
Imports graphics, lattice, grid, foreach, utils, methods, oligoClasses(>= 1.19.30), Biobase, GenomicRanges
Suggests crlmm, IRanges, RUnit
System Requirements
Depends On Me mBPCR
Imports Me crlmm, MinimumDistance, phenoTest
Suggests Me Category, oligoClasses, VanillaICE

Package Downloads

Package Source SNPchip_2.4.0.tar.gz
Windows Binary (32- & 64-bit)
MacOS 10.5 (Leopard) SNPchip_2.4.0.tgz
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