Phenotypes and cellular organizational units

Bioconductor version: Release (2.11)

Tools to integrate, annotate, and link phenotypes to cellular organizational units such as protein complexes and pathways.

Author: Nolwenn Le Meur and Robert Gentleman

Maintainer: Nolwenn Le Meur <nlemeur at gmail.com>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script PCpheno Vignette
PDF   Reference Manual


biocViews GraphsAndNetworks, NetworkAnalysis, Proteomics, Software
Version 1.20.0
In Bioconductor since BioC 2.2 (R-2.7)
License Artistic-2.0
Depends R (>= 2.10), Category, ScISI(>= 1.3.0), SLGI, ppiStats, ppiData, annotate(>= 1.17.4)
Imports AnnotationDbi, Biobase, Category, GO.db, graph, graphics, GSEABase, KEGG.db, methods, ScISI, stats, stats4
Suggests KEGG.db, GO.db, org.Sc.sgd.db
System Requirements
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source PCpheno_1.20.0.tar.gz
Windows Binary PCpheno_1.20.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) PCpheno_1.20.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center