nucleR
Nucleosome positioning package for R
Bioconductor version: 2.10
Nucleosome positioning for Tiling Arrays and Next Generation Sequencing Experiments
Author: Oscar Flores, David Rossell
Maintainer: Oscar Flores <oflores at mmb.pcb.ub.es>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("nucleR")
To cite this package in a publication, start R and enter:
citation("nucleR")
Documentation
| R Script | Quick analysis of nucleosome positioning experiments | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | ChIPseq, Genetics, HighThroughputSequencing, Microarray, Sequencing, Software |
| Depends | methods, BiocGenerics(>= 0.1.0), IRanges(>= 1.13.5), Biobase(>= 2.15.1), ShortRead, parallel |
| Imports | methods, BiocGenerics, IRanges, Biobase, ShortRead, GenomicRanges, stats |
| Suggests | |
| System Requirements | |
| License | LGPL (>= 3) |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.4.0 |
| Since | Bioconductor 2.9 (R-2.14) |
Package Downloads
| Package Source | nucleR_1.4.0.tar.gz |
| Windows Binary | nucleR_1.4.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | nucleR_1.4.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!
Contact us: webmaster@bioconductor.org
Hosting provided by Fred Hutchinson Cancer Research Center
Copyright © 2003 - 2012
