nucleR

Nucleosome positioning package for R

Bioconductor version: 2.10

Nucleosome positioning for Tiling Arrays and Next Generation Sequencing Experiments

Author: Oscar Flores, David Rossell

Maintainer: Oscar Flores <oflores at mmb.pcb.ub.es>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("nucleR")

To cite this package in a publication, start R and enter:

    citation("nucleR")

Documentation

PDF R Script Quick analysis of nucleosome positioning experiments
PDF   Reference Manual
Text   NEWS

Details

biocViews ChIPseq, Genetics, HighThroughputSequencing, Microarray, Sequencing, Software
Depends methods, BiocGenerics(>= 0.1.0), IRanges(>= 1.13.5), Biobase(>= 2.15.1), ShortRead, parallel
Imports methods, BiocGenerics, IRanges, Biobase, ShortRead, GenomicRanges, stats
Suggests
System Requirements
License LGPL (>= 3)
URL
Depends On Me
Imports Me
Suggests Me
Version 1.4.0
Since Bioconductor 2.9 (R-2.14)

Package Downloads

Package Source nucleR_1.4.0.tar.gz
Windows Binary nucleR_1.4.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary nucleR_1.4.0.tgz
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