org.Sc.sgd.db

Genome wide annotation for Yeast

Bioconductor version: 2.8

Genome wide annotation for Yeast, primarily based on mapping using ORF identifiers from SGD.

Author: Marc Carlson, Seth Falcon, Herve Pages, Nianhua Li

Maintainer: Biocore Data Team <biocannotation at lists.fhcrc.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("org.Sc.sgd.db")

To cite this package in a publication, start R and enter:

    citation("org.Sc.sgd.db")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, Saccharomyces_cerevisiae
Depends R (>= 2.7.0), methods, AnnotationDbi(>= 1.13.17)
Imports methods, AnnotationDbi
Suggests annotate
System Requirements
License Artistic-2.0
URL
Depends On Me LiquidAssociation, yeast2.db, ygs98.db
Imports Me apComplex, clusterProfiler, GOSemSim, ScISI
Suggests Me GenomicRanges, leeBamViews, PCpheno, ppiData, RpsiXML, SLGI, yeastExpData
Version 2.5.0

Package Downloads

Package Source org.Sc.sgd.db_2.5.0.tar.gz
Windows Binary org.Sc.sgd.db_2.5.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary org.Sc.sgd.db_2.5.0.tgz
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