survcomp

Performance Assessment and Comparison for Survival Analysis

Bioconductor version: 2.8

R package providing functions to assess and to compare the performance of risk prediction (survival) models.

Author: Benjamin Haibe-Kains, Markus Schroeder, Christos Sotiriou, Gianluca Bontempi, John Quackenbush

Maintainer: Benjamin Haibe-Kains <bhaibeka at jimmy.harvard.edu>, Markus Schroeder <mschroed at jimmy.harvard.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("survcomp")

To cite this package in a publication, start R and enter:

    citation("survcomp")

Documentation

PDF R Script SurvComp: a package for performance assessment and comparison for survival analysis
PDF   Reference Manual

Details

biocViews GeneExpression, DifferentialExpression, Visualization
Depends survival, ipred, prodlim, survivalROC, SuppDists, grid, rmeta, bootstrap
Imports
Suggests Hmisc, CPE, clinfun, survJamda, Biobase
System Requirements
License Artistic-2.0
URL http://compbio.dfci.harvard.edu
Depends On Me genefu
Imports Me
Suggests Me breastCancerMAINZ, breastCancerNKI, breastCancerTRANSBIG, breastCancerUNT, breastCancerUPP, breastCancerVDX
Version 1.2.1
Since Bioconductor 2.8 (R-2.13)

Package Downloads

Package Source survcomp_1.2.1.tar.gz
Windows Binary survcomp_1.2.1.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary survcomp_1.2.1.tgz
Package Downloads Report Download Stats

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