maigesPack

Functions to handle cDNA microarray data, including several methods of data analysis

Bioconductor version: 2.8

This package uses functions of various other packages together with other functions in a coordinated way to handle and analyse cDNA microarray data

Author: Gustavo H. Esteves <gesteves at gmail.com>, with contributions from Roberto Hirata Jr <hirata at ime.usp.br>, E. Jordao Neves <neves at ime.usp.br>, Elier B. Cristo <elier at ime.usp.br>, Ana C. Simoes <anakqui at ime.usp.br> and Lucas Fahham <fahham at linux.ime.usp.br>

Maintainer: Gustavo H. Esteves <gesteves at gmail.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("maigesPack")

To cite this package in a publication, start R and enter:

    citation("maigesPack")

Documentation

PDF R Script maigesPack Tutorial
PDF   Reference Manual

Details

biocViews Microarray, TwoChannel, Preprocessing, Bioinformatics, DifferentialExpression, Clustering, Classification, GraphsAndNetworks
Depends R (>= 2.0.0), convert, graph, limma, marray, methods
Imports
Suggests amap, annotate, class, e1071, MASS, multtest, OLIN, R2HTML, rgl, som
System Requirements
License GPL (>= 2)
URL http://www.maiges.org/en/software/
Depends On Me
Imports Me
Suggests Me
Version 1.16.0
Since Bioconductor 2.1 (R-2.6)

Package Downloads

Package Source maigesPack_1.16.0.tar.gz
Windows Binary maigesPack_1.16.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary maigesPack_1.16.0.tgz
Package Downloads Report Download Stats

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