To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GSRI")

In most cases, you don't need to download the package archive at all.

GSRI

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see GSRI.

Gene Set Regulation Index

Bioconductor version: 2.8

The GSRI package estimates the number of differentially expressed genes in gene sets, utilizing the concept of the Gene Set Regulation Index (GSRI).

Author: Julian Gehring, Kilian Bartholome, Clemens Kreutz, Jens Timmer

Maintainer: Julian Gehring <julian.gehring at fdm.uni-freiburg.de>

Citation (from within R, enter citation("GSRI")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GSRI")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GSRI")

PDF		gsri.pdf
PDF		Reference Manual

biocViews	Bioinformatics, DifferentialExpression, Genetics, Microarray, Software, Transcription
Version	2.0.0
In Bioconductor since	BioC 2.6 (R-2.11) (6 years)
License	GPL-3
Depends	R (>= 2.12.1), fdrtool
Imports	methods, graphics, stats, utils, genefilter, Biobase, GSEABase, les(>= 1.1.6)
LinkingTo
Suggests	limma, hgu95av2.db
SystemRequirements
Enhances	multicore
URL	http://www.fdmold.uni-freiburg.de/~jgehring/
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	GSRI_2.0.0.tar.gz
Windows Binary	GSRI_2.0.0.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/GSRI/tree/release-2.8
Package Short Url	http://bioconductor.org/packages/GSRI/
Package Downloads Report	Download Stats

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