BSgenome.Hsapiens.UCSC.hg19

Homo sapiens (Human) full genome (UCSC version hg19)

Bioconductor version: Release (2.12)

Homo sapiens (Human) full genome as provided by UCSC (hg19, Feb. 2009) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("BSgenome.Hsapiens.UCSC.hg19")

To cite this package in a publication, start R and enter:

    citation("BSgenome.Hsapiens.UCSC.hg19")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, Genetics, Homo_sapiens
Version 1.3.19
License Artistic-2.0
Depends BSgenome(>= 1.25.4)
Imports BSgenome
Suggests
System Requirements
URL
Depends On Me chimera, FDb.InfiniumMethylation.hg19, IlluminaHumanMethylation450kprobe
Imports Me
Suggests Me biovizBase, BSgenome, FDb.FANTOM4.promoters.hg19, FDb.UCSC.snp135common.hg19, FDb.UCSC.snp137common.hg19, GenomicFeatures, ggbio, gmapR, Gviz, MEDIPS, MiRaGE, oneChannelGUI, r3Cseq, R453Plus1Toolbox, RSVSim, rtracklayer, SNPlocs.Hsapiens.dbSNP.20100427, SNPlocs.Hsapiens.dbSNP.20101109, SNPlocs.Hsapiens.dbSNP.20110815, SNPlocs.Hsapiens.dbSNP.20111119, SNPlocs.Hsapiens.dbSNP.20120608, VariantAnnotation

Package Downloads

Package Source BSgenome.Hsapiens.UCSC.hg19_1.3.19.tar.gz
Windows Binary BSgenome.Hsapiens.UCSC.hg19_1.3.19.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BSgenome.Hsapiens.UCSC.hg19_1.3.19.tgz
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